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Education at DRCMR

An education in neuroimaging is challenging for many reasons. Students come from many disciplines each with their own terminologies, and the range of topics and techniques to master is often very wide. We have an educational programme that teaches everyone the basics on everything no matter what your previous training.

 There are a number of problems faced by most neuroimaging centres. Apart removing ferrous-metallic objects from every possible pocket, these include issues as basic as how to understand one another. Part of the challenge is that students come from diverse backgrounds, mathematics, physics, biology, medicine, economics, psychology, and even further afield. This means that most students are good at some things but ill-equipped for others. Typically it’s hard to know what it is you need to know, and what it is you don’t know.  Our solution to this problem is to provide a wide-ranging curriculum that covers all the basic knowledge and skills necessary to follow what is going on at DRCMR and to be able to make an intellectual contribution whatever the topic. Everyone is expected to be able to ask questions and offer contributions in fields outside of your own. The curriculum comprises several modules that most students are expected to take whilst at DRCMR. 

Neuroimaging Foundations

In Neuroimaging Foundations you will work on the most foundational skills necessary to learn the methods and techniques that are commonly employed at DRCMR. This foundations course assumes almost no prior knowledge and teaches you philosophy of science, foundational maths, and statistics, and programming in Matlab. All PhD / Masters / Researchers-new-to-the-field are expected to attend. Accommodations can be made for those with special constraints (e.g. dual affiliation), or with pre-existing training (e.g. already done similar courses), on a case-by-case basis. Neuroimaging Foundations acts as a primer for our methods specific course, Neuroimaging Basics. 

Neuroimaging Basics

Neuroimaging Basics is taught as a peer2peer course where students teach each other with expert help. We cover every major technique used at DRCMR, our philosophy is that everyone should have a basic grasp of everyone else’s research, such that we can critique and think creatively about cross-disicplinary and cross-methodological collaborations. We also have stand alone workshops in Brain stimulation techniques, Neuroanatomy, Basic Neuroscience, Data quality and much else, on a rolling basis. 

Neuroimaging Pragmatics

Neuroimaging Pragmatics is an informal series of lectures, organised by the student group, on pragmatic skills such as grant writing, giving talks, paper writing, ergonomics, and so on. How to give a project presentation, How to write a paper, How to review a paper, How to give a talk, How to prioritize time, How to apply for funding, How to find a problem worth solving, Responsible conduct of research, Stimulus delivery, Psychopy, psychtoolbox, triggers, picolog, button boxes, force transducers, Recording Electrophysiological signals, Physiological monitoring, Data quality checking, Data management and backup, Producing figures in Matlab & Inkscape, Auditory stimulation, Strategies for literature searching, Ethics applications and practice. 

MR Driver License

Scanner safety and scanner license courses are organised by the physics group. This gives students the basic training necessary to work in an MR environment, and the scanner license is the qualification that students need to acquire in order to autonomously operate an MR machine.  

MRI Acquisiiton

MRI acquisition course is our course on MR physics. It teaches all of the fundamental physics underlying the magnetic resonance techniques are employed at DRCMR. The course introduces MRI starting from a level requiring little or no MR experience. Lectures cover MR understanding, acquisition methods and parameters. The target audience is employees and students at the DRCMR but the course is open and free for external participants. A technical background is not required. The main aim is to provide a basis for understanding pitfalls and literature. It covers the MR prerequisites needed to follow the more technical course Medical Magnetic Resonance Imaging offered as part of the Medicine & Technology program at the Technical University of Denmark in the spring, and which is also available for non-DTU-students (offered under "Open University"). Besides knowledge of MR basics, the DTU course also requires math and programming skill.

Recent Publications

Beha GH, Stemmerik MG, Boer VO, van der Ploeg AT, van der Beek NAME, Andersen H, Marsman A, Jacobsen LN, Theunissen MTM, Petersen ET, Vissing J. 2025. Quantification of muscle glycogen distribution in Pompe disease using 7 Tesla 13C NMR spectroscopy. JNNP. Accepted.

Güler S, Zivkovic I, Boer VO, Zhurbenko V, Petersen ET. 2025. The mode of operation of high-impedance coils and shielded coaxial cable coils: A comparative study. NMR Biomed. 38(8): e70071. https://doi.org/10.1002/nbm.70071

London A, Schaufuss A, Povazan M, Dichman M-L, Merhout J, Dirksen C, Madsbad S, Siebner HR, Lundsgaard A, Fritzen AM, Kiens B, Bojsen-Møller KN. 2025. Effects of acute iso- and hypocaloric carbohydrate restriction on liver fat and glucose and lipid metabolism. J Clin Endocrinol Metab. dgaf382, https://doi.org/10.1210/clinem/dgaf382

Güler S, Povazan M, Zhurbenko V, Zivkovic I. 2025. An 8Tx/32Rx head-neck coil at 7T by combining 2Tx/32Rx Noval coil with 6TRx shielded coaxial cable elements. Magn Reson Med. 93(2): 864-872. https://doi.org/10.1002/mrm.30297

Madelung CF, Løkkegaard A, Fuglsang SA, Marques MM, Boer VO, Madsen KH, Hejl A-M, Meder D, Siebner HR. 2025. High-resolution mapping of substantia nigra in Parkinson’s disease using 7 tesla magnetic resonance imaging. Npj Parkinsons Dis. 11(113). https://doi.org/10.1038/s41531-025-00972-7

London A, Richter MM, Sjøberg KA, Wewer Albrechtsen NJ, Povazan M, Drici L, Schaufuss A, Madsen L, Øyen J, Madsbad S, Juul Holst J, van Hall G, Siebner HR, Richter EA, Kiens B, Lundsgaard A, Bojsen-Møller KN. 2024. The impact of short-term eucaloric low- and high-carbohydrate diets on liver triacylglycersol content in males with overweight and obesity: a randomized crossover study. Am J Clin Nutrition. 120(2): 283-293. https://doi.org/10.1016/j.ajcnut.2024.06.006

Madsen MAJ, Povazan M, Wiggermann V, Lundell H, Blinkenberg M, Romme Christensen J, Sellebjerg F, Siebner HR. 2024. Association of cortical lesions with regional glutamate, GABA, N-Acetylaspartate, and Myoinositol levels in patients with multiple sclerosis. Neurology. 103(1): e209543. https://doi.org/10.1212/WNL.0000000000209543

Stærkind H, Jensen K, Müller JH, Boer VO, Polzik ES, Petersen ET. 2024. High-field optical cesium magnetometer for magnetic resonance imaging. PRX Quantum. 5(2): 020320. https://doi.org/10.1103/PRXQuantum.5.020320

Stærkind H, Jensen K, Müller JH, Boer VO, Petersen ET, Polzik ES. 2023. Precision measurement of the excited state Landé g-factor and diamagnetic shift of the Cesium D2 line. Phys Rev X. 13(2): 021036. https://doi.org/10.1103/PhysRevX.13.021036

Boer VO, Pedersen JO, Arango N, Kuang I, Stockmann J, Petersen ET. 2022. Improving brain B0 shimming using an easy and accessible multi-coil shim array at ultra-high field. MAGMA. 35(6): 943-951. https://doi.org/10.1007/s10334-022-01014-6

Andersen M, Laustsen M, Boer V. Accuracy investigations for volumetric head-motion navigators with and without EPI at 7 T. 2022. Magn Reson Med. 88(3): 1198-1211. https://doi.org/10.1002/mrm.29296

Madsen MAJ, Wiggermann V, Marques MFM, Lundell H, Cerri S, Puonti O, Blinkenberg M, Romme Christensen J, Sellebjerg F, Siebner HR. 2022. Linking lesions in sensorimotor cortex to contralateral hand function in multiple sclerosis: a 7 T MRI study. Brain. 145(10): 3522-3535. https://doi.org/10.1093/brain/awac203

Sandström KO, Baltzersen OB, Marsman A, Lemvigh CK, Boer VO, Bojesen KB, Nielsen MØ, Lundell H, Sulaiman DK, Sørensen ME, Fagerlund B, Lahti AC, Syeda WT, Pantelis C, Petersen ET, Glenthøj BY, Siebner HR, Ebdrup BH. 2022. Add-on memantine to dopamine antagonism to improve negative symptoms at first psychosis – the AMEND trial protocol. Front Psychiatry. 13: 889572. https://doi.org/10.3389/fpsyt.2022.889572

Madelung CF, Meder D, Fuglsang SA, Marques MM, Boer VO, Madsen KH, Petersen ET, Hejl A-M, Løkkegaard A, Siebner HR. 2022. Locus coeruleus shows a spatial pattern of structural disintegration in Parkinson’s disease. Movement Disord. 37(3): 479-489. https://doi.org/10.1002/mds.28945

 

Selected Recent Conference Abstracts

Engel K, Wiggermann V, Ronen I, Lundell H. Correction of phase fluctuations in diffusion-weighted MRS at high b-values with external phantom reference. ISMRM annual meeting. 05/2025,

Madsen MAJ, Christiansen L, Povazan M, Wiggermann V, Siebner HR. Regional glutamate but not GABA concentration scales with TMS-based measures of cortical excitability – a combined 7T MR spectroscopy and TMS study of the human primary motor hand area. Brain Stimulation, Kyoto, Japan, 02/2025 [Brain Stimulation 18(1) 576, 2025]

Madsen MAJ, Wiggermann V, Lundell H, Christiansen L, Romme Christensen J, Blinkenberg M, Sellebjerg F, Siebner HR. The impact of pathway-specific cortical and white matter pathology on trans-callosal conduction and inhibition in multiple sclerosis, ECTRIMS, Copemhagen, Denmark, 09/2024

Madsen MAJ, Wiggermann V, Christiansen L, Povazan M, Lundell H, Puonti O, Romme Christensen J, Sellebjerg F, Siebner HR. The ipsilateral silent period and its link to cortical lesions in multiple sclerosis, Brain Stimulation, Lisbon, Portugal, 02/2023, [Brain Stimulation 14(6) 1628, 2023]

Stemmerik M, Beha G, Boer V, Marsman A, Jacobsen L, Petersen E, Vissing J. 2022. Using high-field magnetic resonance spectroscopy to measure muscle glycogen in patients with McArdle disease. Neuromuscular Disorders. 32. S73-S74.

Beha G, Stemmerik M, Boer V, Marsman A, Jacobsen L, Petersen E, Vissing J. 2022. Quantification of glycogen distribution in late-onset Pompe patients using 7 Tesla C13 NMR spectroscopy. Neuromuscular Disorders. 32. S73.

Madsen MAJ, Wiggermann V, Povazan M, Lundell H, Boer VO, Marsman A, Blinkenberg MB, Romme Christensen J, Sellebjerg FT, Siebner HR. 2022. Linking cortical demyelination to changes in brain metabolism in multiple sclerosis: a 7T MR spectroscopy study. ECTRIMS annual (virtual) meeting.

Güler S, Costa G, Boer V, Paulides M, Baltus P, Petersen E, Zivkovic I. 2022. Shielded coaxial cable coils: the array configuration for maximized central SNR at 7T MRI. Joint Annual Meeting ISMRM-ESMRMB, 31st annual ISMRM meeting.

Güler S, Zhurbenko V, Zivkovic I, Boer V, Petersen ET. 2022. Second resonance mode ensure intrinsic low coupling between elements on shielded-coaxial-cable coil designs. Joint Annual Meeting ISMRM-ESMRMB, 31st annual ISMRM meeting.

Group Members

Vanessa Wiggermann

Group Leader

Henrik Lundell

Group Leader

Lars G. Hanson

Sebastian Ladegaard Storm

Paul Wessel de Bruin

Ahmed Ibrahim Al-Rahimi

Show all group members (22)

External Collaborators

Jeroen Hendrikse

Department of Radiology, University Medical Center Utrecht, The Netherlands


Dennis Klomp

Department of Radiology, University Medical Center Utrecht, The Netherlands


Andrew Webb

Department of Radiology, Leiden University Medical Center, The Netherlands


Matthias van Osch

Department of Radiology, Leiden University Medical Center, The Netherlands


Itamar Ronen

Department of Radiology, Leiden University Medical Center, The Netherlands


Karin Markenroth Bloch

Swedish National 7T facility, Lund, Sweden


Gunther Helms

Swedish National 7T MRI Facility, Medical Radiation Physics, Lund, Sweden


Kirsten Borup Bojesen

Center for Neuropsychiatric Schizophrenia Research, Mental Health Services, Capital Region of Denmark, Denmark